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Publications
Bundy R.M., Boiteau R.M., McLean C., Turk-Kubo K.A., McIlvin M.R., Saito M.A., Van Mooy B.A.S, Repeta D.J. Distinct siderophores contribute to iron cycling in the mesopelagic at Station ALOHA. Front Mar Sci. 5:61. doi:10.3389/fmars.2018.00061.
Frischkorn K.R., Haley S.T., Dyhrman S.T. Coordinated gene expression between Trichodesmium and its microbiome over day-night cycles in the North Pacific Subtropical Gyre. ISME J. 12:997-1007. doi:10.1038/s41396-017-0041-5.
White A.E., Watkins-Brandt K.S., Church M.J. Temporal variability of Trichodesmium spp. and diatom-diazotroph assemblages in the North Pacific Subtropical Gyre. Front Mar Sci. 5:27. doi:10.3389/fmars.2018.00027.
Aylward F.O., Boeuf D., Mende D.R., Wood-Charlson E.M., Vislova A., Eppley J.M., Romano A.E., DeLong E.F. Diel cycling and long-term persistence of viruses in the ocean's euphotic zone. PNAS USA. 114(43):11446-11451. doi:10.1073/pnas.1714821114.
Baran N., Goldin S., Maidanik I., Lindell D. Quantification of diverse virus populations in the environment using the polony method. Nat Microbiol. 30 Oct. doi:10.1038/s41564-017-0045-y.
Beckett S.J., Weitz J.S. Disentangling niche competition from grazing mortality in phytoplankton dilution experiments. PLoS ONE. 12(5): e0177517. doi:10.1371/journal.pone.0177517.
Berney C., Ciuprina A., Bender S., Brodie J., Edgcomb E., Kim E., Rajan J., Wegener Parfrey L., Adl S., Audic S., Bass D., Caron D.A., Cochrane G., Czech L., Dunthorn M., Geisen S., Oliver Glöckner F., Mahóe F., Quast C., Kaye J.Z., Simpson A.G.B., Stamatakis A, del Campo J., Yilmaz P., de Vargas C. UniEuk: Time to speak a common language in protistology! J Euk Microbiol. 64(3):407-411. doi:10.1111/jeu.12414.
Biller S.J., McDaniel L.D., Breitbart M., Rogers E., Paul J.H., Chisholm S.W. Membrane vesicles in sea water: Heterogeneous DNA content and implications for viral abundance estimates. ISME J. 11(2):394-404. doi:10.1038/ismej.2016.134.
Böttjer D., Dore J.E., Karl D.M., Letelier R.M., Mahaffey C., Wilson S.T., Zehr J., Church M.J. Temporal variability of nitrogen fixation and particulate nitrogen export at Station ALOHA. Limnol Oceanogr. 62:200-216. doi:10.1002/lno.10386.
Braakman R., Follows M.J., Chisholm S.W. Metabolic evolution and the self-organization of ecosystems. PNAS USA. 114(15):E3091-E3100. doi:10.1073/pnas.1619573114.
Cael B.B., Bisson K., Follows M.J. How have recent temperature changes affected the efficiency of ocean biological carbon export? Limnol Oceanogr Lett. 2(4):113-118. doi:10.1002/lol2.10042.
Caron D.A. Acknowledging and incorporating mixed nutrition into aquatic protistan ecology, finally. Enviro Microbiol Rep. 9(1):41-43. doi:10.1111/1758-2229.12514.
Caron D.A., Alexander H., Allen A.E., Archibald J.M., Armbrust E.V., Bachy C., Bharti A., Bell C.J., Dyrhman S.T., Guida S., Heidelberg K.B., Kaye J.Z., Metzner J., Smith S.R., Worden A.Z. Probing the evolution, ecology and physiology of marine protists using transcriptomics. Nat Rev Microbiol. 15:6-20. doi:10.1038/nrmicro.2016.160.
Caron D.A., Connell P.E., Schaffner R.A., Schnetzer A., Fuhrman J.A., Countway P.D., Kim D.Y. Planktonic food web structure at a coastal time-series site: I. Partitioning of microbial abundances and carbon biomass. Deep-Sea Research I. 121:14-29. doi:10.1016/j.dsr.2016.12.013.
Casey J.R., Ferrón S., Karl D.M. Light-enhanced microbial organic carbon yield. Front Microbiol. 8:2157. doi:10.3389/fmicb.2017.02157.
Cermak N., Becker J.W., Knudsen S.M., Chisholm S.W., Manalis S.R., Polz M.F. Direct single cell biomass estimates for marine bacteria via Archimedes' principle. ISME J. 11(3):825-828. doi:10.1038/ismej.2016.161.
Chisholm S.W. Prochlorococcus. Current Biol 27(11):R431-510. doi:10.1016/j.cub.2017.02.043.
Clayton S., Dutkiewicz S., Jahn O., Hill C.N., Heimbach C.N., Follows M.J. Biogeochemical versus ecological consequences of modeled ocean physics. Biogeosciences. 14(110:2877-2889. doi:10.5194/bg-14-2877-2017.
Connell P.E., Campbell V., Gellene A.G., Hu S.K., Caron D.A. Planktonic food web structure at a coastal time-series site: II. Spatiotemporal variability of microbial trophic activities. Deep-Sea Research I. 121:210.223. doi:10.1016/j.dsr.2017.01.007.
Cubillos-Ruiz A., Berta-Thompson J.W., Becker J.W., van der Donk W.A., Chisholm S.W. Evolutionary radiation of lanthipeptides in marine cyanobacteria. PNAS USA. 114(27):E5424-E5433. doi:10.1073/pnas.1700990114.
Cunningham B.R., John S.G The effect of iron limitation on cyanobacteria major nutrient and trace element stoichiometry. Limnol Oceanogr. 62(2):846-858. doi:10.1002/lno.10484.
Duhamel S., Bjorkman K.M., Repeta D.J., Karl D.M. Phosphorus dynamics in the southeast subtropical Pacific Ocean. Prog Oceanogr. 151:261-274. doi:10.1016/j.pocean.2016.12.007.
Eichner M.J., Klawonn I., Wilson S.T., Littmann S., Whitehouse M., Church M.J., Kuypers M.M., Karl D.M., Ploug H. Chemical microenvironments and single-cell carbon and nitrogen uptake in field-collected colonies of Trichodesmium under different pCO2. ISME J. 11:1305-1317. doi:10.1038/ismej.2017.15.
Goldberg S.J., Nelson C.E., Viviani D.A., Shulse C.N., Church M.J. Cascading influence of inorganic nitrogen sources on DOM production, composition, lability and microbial community structure in the open ocean. Enviro Microbiol. 19(9):3450-3464. doi:10.1111/1462-2920.13825.
Gradoville M.R., Bombar D., Crump B., Letelier R.M., Zehr J.P. White, A.E. Diversity and activity of nitrogen-fixing communities across ocean basins. Limnol Oceanogr. 62(5):1895-1909. doi:10.1002/lno.10542.
Gradoville M.R., Crump B.C., Letelier R.M., Church M.J., White A.E. Microbiome of Trichodesmium colonies from the North Pacific Subtropical Gyre. Front Microbiol. 8:1122. doi:10.3389/fmicb.2017.01122.
Heal K.R., Qin W., Ribalet F., Bertagnolli A.D., Coyote-Maestas W., Hmelo L.R., Moffett J.W., Devol A.H., Armbrust E.V., Stahl D.A., Ingalls A.E. Two distinct pools of B12 analogs reveal community interdependencies in the ocean. PNAS USA. 114(2):364-369. doi:10.1073/pnas.1608462114.
Horak R.E.A., Qin W., Bertagnolli A., Nelson A., Heal K.R., Han H., Heller M., Schauer A., Jeffrey W., Armbrust E.V., Moffett J.W., Ingalls A.E., Stahl D.A., Devol A.H. Relative impacts of light, temperature and reactive oxygen on thaumarchaeal ammonia oxidation in the North Pacific Ocean. Limnol and Oceanogr. 1 Sep. doi:10.1002/lno.10665.
Inomura K., Bragg J., Follows M.J. A quantitative analysis of the direct and indirect costs of nitrogen fixation: A model based on Azotobacter vinelandii. ISME J. 11(1):166-175. doi:10.1038/ismej.2016.97.
Kashtan N., Roggensack S.E., Thompson J.W., Grinberg M., Stepanauskas R., Chisholm S.W. Fundamental differences in diversity and genomic population structure between Atlantic and Pacific Prochlorococcus. ISME J. 11:1997-2011. doi:10.1038/ismej.2017.64.
Karl D.M., Church M.J. Ecosystem structure and dynamics in the North Pacific Subtropical Gyre: New views of an old ocean. Ecosystems 112:20th Anniversary. doi:10.1007/s10021-017-0117-0.
Karl D.M., Grabowski E. The importance of H in particulate matter stoichiometry, export and energy flow. Front. Microbiol. 8:826. doi:10.3389/fmicb.2017.00826.
Kujawinski E.B., Longnecker K., Alexander H., Dyhrman S.T., Fiore C.L., Haley S.T., Johnson W.M. Phosphorus availability regulates intracellular nucleotides in marine eukaryotic phytoplankton. Limnol Oceanogr Lett. 2(4):119-129. doi:10.1002/lol2.10043.
Leles S., Mitra A., Flynn K., Stoecher D, Hansen P., Calbet A., McManus G., Sanders R., Caron D., Not F., Hallegraeff G., Paraskevi P., Raven J., Johnson M., Glibert P., Vage S. Oceanic protists with different forms of acquired phototrophy display contrasting biogeographies and abundance. Proc Royal Society B. 284(1860):2017.0664. doi:10.1098/rspb.2017.0664.
Letelier R.M., White A.E., Bidigare R.R., Barone B., Church M.J., Karl D.M. Light absorption by phytoplankton in the North Pacific subtropical gyre. Limnol Oceanogr. 62(4):1526-1540. doi:10.1002/lno.10515.
Limardo A.J., Sudek S., Choi C.J., Poirier C., Rii Y.M., Blum M., Roth R., Goodenough U., Church M.J., Worden A.Z. Quantitative biogeography of picoprasinophytes establishes ecotype distributions and significant contributions to marine phytoplankton. Quantitative biogeography of picoprasinophytes establishes ecotype distributions and significant contributions to marine phytoplankton. Env Microbiol. 19(8):3219-3234. doi:10.1111/1462-2920.13812.
Liu Z., Hu S.K., Campbell V., Tatters A.O., Heidelberg K.B., Caron D.A. Single-cell transcriptomics of small microbial eukaryotes: Limitations and potential. ISME J. 11:1282-1285. doi:10.1038/ismej.2016.190.
Luo E., Aylward F.O., Mende D.R., DeLong E.F. Bacteriophage distributions and temporal variability in the ocean's interior. mBio. 8(6):e01903-17. doi:10.1128/mBio.01903-17.
Mende D.R., Bryant J.A., Aylward F.O., Eppley J.M., Nielsen T.N., Karl D.M., DeLong E.F. Environmental drivers of a genomic transition zone in the ocean's interior (read-only). Nat Microbiol. 2:1367-1373. doi:10.1038/s41564-017-0008-3.
Moisander P., Benavides M., Bonnet S., Berman-Frank I., White A.E., Riemann L. Chasing after non-cyanobacterial nitrogen fixation in marine pelagic environments. Front Microbiol. 8:1736. doi:10.3389/fmicb.2017.01736.
Pelve E., Fontanez K., DeLong E.F. Bacterial succession on sinking particles in the oceans interior. Front Microbiol. 8:2269. doi:10.3389/fmicb.2017.02269.
Qin W., Amin S.A., Lundeen R.A., Heal K.R., Martens-Habbena W., Turkarslan S., Urakawa H., Costa K.C., Hendrickson E.L., Wang T., Beck D.A.C., Tequia S.M., Taub F., Holmes A.D., Lowe T.M., Moffett J.W., Devol A.H., Baliga N.S., Arp D.J., Sayavedra-Soto L.A., Hackett M., Armbrust E.V., Ingalls A.E., Stahl D.A. Stress response of a marine ammonia-oxidizing archaeon informs physiological status of environmental populations. ISME J. 12:508-519. doi:10.1038/ismej.2017.186.
Qin W., Meinhardt K.A., Moffett J.W., Devol A.H., Armbrust E.V., Ingalls A.E., Stahl D.A. Influence of oxygen availability on the activities of ammonia-oxidizing archaea. Env Microbiol Rep. 9:250-256. doi:10.1111/1758-2229.12525.
Read R.W., Berube P.M., Biller S.J., Neveux I., Cubillos-Ruiz A., Chisholm S.W., Grzymski J.J. Nitrogen cost minimization is promoted by structural changes in the transcriptome of N-deprived Prochlorococcus cells. ISME J. 11:2267-2278 doi:10.1038/ismej.2017.88.
Repeta D.J., Boiteau R.M. Organic Nutrient Chemistry and the Marine Microbiome. In: The Chemistry of Microbiomes: Proceedings of a Seminar Series (pp. 43-52). Washington, DC: The National Academies Press. doi:10.17226/24751.
Schwartz D.A., Lindell D. Genetic hurdles limit the arms race between Prochlorococcus and the T7-like podoviruses infecting them. ISME J. 11:1836-1851. doi:10.1038/ismej.2017.47.
Sosa O.A., Repeta D.J., Ferrón S., Bryant J.A., Mende D.R., Karl D.M., DeLong E.F. Isolation and characterization of Bacteria that degrade phosphonates in marine dissolved organic matter. Front Microbiol. 8:1786. doi:10.3389/fmicb.2017.01786.
Stoecker D.K., Hanse P.J., Caron D.A., Mitra A. Mixotrophy in the marine plankton. Ann Rev Mar Sci. 9:311-335. doi:10.1146/annurev-marine-010816-060617.
Sullivan M.B., Weitz J.S., Wilhelm S.W. Viral ecology comes of age. Env Microbiol Rep. 9(1):33-35. doi:10.1111/1758-2229.12504.
Turk-Kubo K.A., Farnelid H.M., Shilova I.N., Henke B., Zehr J.P. Distinct ecological niches of marine symbiotic N2-fixing cyanobacterium Candidatus Atelocyanobacterium thalassa sublineages. J Phycol. 53(2):451-461. doi:10.1111/jpy.12505.
van den Engh G.J., Doggett J.K., Thompson A.W., Doblin M.A., Gimpel C.N.G., Karl D.M. Dynamics of Prochlorococcus and Synechococcus at Station ALOHA revealed through flow cytometry and high-resolution vertical sampling. Front Mar Sci. 4:359. doi:10.3389/fmars.2017.00359.
Viviani D.A., Church M.J. Decoupling between bacterial production and primary production over multiple time scales in the North Pacific Subtropical Gyre. Deep Sea Research I. 121:1332-142. doi:10.1016/j.dsr.2017.01.006.
Weitz J.S., Beckett S.J., Brum J.R., Cael B.B., Dushoff J. Lysis, lysogeny, and virus-microbe ratios. Nature 549(7672):E1-E3. doi:10.1038/nature23295
White A.E., Barone B., Letelier R.M., Karl D.M. Productivity diagnosed from the diurnal cycle of particulate carbon in the North Pacific Subtropical Gyre. Geophys Res Lett. 44(8):3752-3760. doi:10.1002/2016GL071607.
Wilson S.T., Aylward F.O., Ribalet F., Barone B., Casey J.R., Connell P.E., Eppley J.M., Ferrón S., Romano A.E., Turk-Kubo K.A., Vislova A., Armbrust E.V., Caron D.A., Church M.J., Zeh J.P., Karl D.M., DeLong E.F. Coordinated regulation of growth, activity and transcription in natural populations of the unicellular nitrogen-fixing cyanobacterium Crocosphaera (read-only). Nature Microbiol. 2:17118. doi:10.1038/nmicrobiol.2017.118. Nature Microbiology's "Behind the Paper" blog.
Wilson S.T., Ferrón S., Karl D.M. Interannual variability of methane and nitrous oxide in the North Pacific Subtropical Gyre Geophys Res Lett. 44(19):9885-9892. doi:10.1002/2017GL074458.
Zigah P.K., McNichol A.P., Xu L., Johnson C., Santinelli C., Karl D.M., Repeta D.J. Allochthonous sources and dynamic cycling of ocean dissolved organic carbon revealed by carbon isotopes. Geophys Res Lett. 44(5):2407-2415. doi:10.1002/2016GL071348.
Zehr J.P., Weitz J.S., Joint I. How microbes survive in the open ocean. Science. 357(6352):646-647. doi:10.1126/science.aan5764.
Ashkezari M.D., Hill C.N., Follett C.N., Forget G., Follows M.J. Oceanic eddy detection and lifetime forecast using machine learning methods. Geophys Res Lett. 43(23)12234-12241. doi:10.1002/2016GL071269.
Berube P.M., Coe A., Roggensack S.E., Chisholm S.W. Temporal dynamics of Prochlorococcus cells with the potential for nitrate assimilation in the subtropical Atlantic and Pacific oceans. Limnol Oceanogr. 61(2):482-495. doi:10.1002/lno.10226.
Biller S.J., Coe A., Chisholm S.W. Torn apart and reunited: Impact of a heterotroph on the transcriptome of Prochlorococcus. ISME J. 10:2831-2843. doi:10.1038/ismej.2016.82.
Boiteau R.M., Mende D.R., Hawco N.J., McIlvin M.R., Fitzsimmons J.N., Saito M.A., Sedwick P.N., DeLong E.F., Repeta D.J. Siderophore-based microbial adaptations to iron scarcity across the eastern Pacific Ocean. PNAS USA. 113(50):14237-14242. doi:10.1073/pnas.1608594113.
Boiteau R.M., Till C.P., Ruacho A., Bundy R.M., Hawco N.J., McKenna A.M., Barbeau K.A., Bruland K.W., Saito M.A., Repeta D.K. Structural characterization of natural nickel and copper binding ligands along the US GEOTRACES Eastern Pacific Zonal transect. Front Mar Sci. 3:243. doi:10.3389/frmars.2016.00243.
Bryant J.A., Aylward F.O., Eppley J.M., Karl D.M., Church M.J., DeLong E.F. Wind and sunlight shape microbial diversity in surface waters of the North Pacific Subtropical Gyre. ISME J. 10:1308-1322. doi:10.1038/ismej.2015.221.
Bryant J.A., Clemente T.M, Viviani D.A., Fong A.A., Thomas K.A, Kemp P., Karl D.M., White, A., DeLong E.F. Diversity and activity of communities inhabiting plastic debris in the North Pacific Gyre. mSystems. 1(3):e00024-16. doi:10.1128/mSystems.00024-16.
Cael B.B., Follows M.J. On the temperature dependence of oceanic export efficiency. Geophys Res Lett. 43. doi:10.1002/2016GL068877.
Caron D.A. Ocean science: The rise of Rhizaria. Nat News & Views. 532:444-445. doi:10.1038/nature17892.
Caron D.A. Mixotrophy stirs up our understanding of marine food webs. (commentary on Ward & Follows). PNAS USA. 113(11):2806-2808. doi:10.1073/pnas.1600718113.
Casey J.R., Mardinoglu A., Nielsen J., Karl D.M. Adaptive Evolution of Phosphorus Metabolism in Prochlorococcus. mSystems. 15 Nov. doi:10.1128/mSystems.00065-16.
Coe A., Ghizzoni J., LeGault K., Biller S., Roggensack S.E., Chisholm S.W. Survival of Prochlorococcus in extended darkness. Limnol Oceanogr. 61(4):1375-1388. doi:10.1002/lno.10302.
Collins J.R., Edwards B.R., Fredricks H.F., Van Mooy B.A.S. LOBSTAHS: An adduct-based lipidomics strategy for discovery and identification of oxidative stress biomarkers. Anal Chem. 88:7154-7162. doi:10.1021/acs.analchem.6b01260.
Cornejo-Castillo F.M., Cabello A.M., Salazar G., Sánchez-Baracaldo P., Lima-Mendez G., Hingamp P., Alberti A., Sunagawa S., Bork P., De Vargas C., Raes J., Bowler C., Wincker P., Zehr J.P., Gasol J.M., Massana R., Acinas S.G. Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton. Nat Comms. 7:11071. doi:10.1038/ncomms11071.
Diaz J.M., Haley S.T., Longo A.F., Ingall E.D., Björkman K.M., Karl D.M., Dyhrman S.T. Polyphosphate content and dynamics at Station ALOHA, North Pacific Subtropical Gyre. Limnol Oceanogr. 61(1):227-239. doi:10.1002/lno.10206.
Farnelid H.M., Turk-Kubo K.A., Muñoz-Marín M., Zehr J.P. New insights into the distribution and ecology of the nitrogen-fixing symbiont (UCYN-A). Aquat Microbiol Ecol. 77:125-138. doi:10.3354/ame01794.
Farnelid H.M., Turk-Kubo K.A., Zehr J.P. Identification of associations between bacterioplankton and photosynthetic picoeukaryotes in coastal waters. Front Microbiol. 7:339. doi:10.3389/fmicb.2016.00339.
Ferrón S., del Valle D.A., Björkman K.M., Quay P.D., Church M.J., Karl D.M. Application of membrane inlet mass spectrometry to measure aquatic gross primary production by the 18O in vitro method. Limnol Oceanogr. 28 June. doi:10.1002/lom3.10116.
Foreman R., Segura-Noguera M., Karl D.M. Validation of Ti (III) as a reducing agent in the chemiluminescent determination of nitrate and nitrite in seawater. Mar Chem. 186:83-89. doi:10.1016/j.marchem.2016.08.003.
Gifford S.M., Becker J.W., Sosa O.A., Repeta D.J., DeLong E.F. Quantitative transcriptomics reveals the growth- and nutrient-dependent response of a streamlined marine methylotroph to methanol and naturally occurring dissolved organic matter. mBio.7:e01279-16. doi:10.1128/mBio.01279-16.
Hyrkas J., Clayton S., Ribalet F., Halperin D., Armbrust A.V., Howe B. Scalable clustering algorithms for continuous environmental flow cytometry. Bioinfo. 32(3):417-423. doi:10.1093/bioinformatics/btv594.
Laws E.A., Bidigare R.R., Karl D.M. Enigmatic relationship between chlorophyll a concentrations and photosynthetic rates at Station ALOHA. Heliyon 2:e00156. doi:101016/j.heliyon.2016.e-00156.
Ingalls, A.E. Signal from the subsurface. Nat Geosci. 9:572-573. doi:10.1038/ngeo2765.
Mende D.R., Aylward F.O., Eppley J.M, Nielsen T.N., DeLong E.F. Improved environmental genomes via integration of metagenomic and single-cell assemblies. Front Microbiol. 7:143 doi:10.3389/fmicb.2016.00143.
Mitra A., Flynn K.J., Tillmann, U., Raven J., Caron D., Stoecker D., Not F., Hansen P., Hallegraeff G., Sanders R., Wilken S., McManus G., Johnson M., Pitta P., Våge S., Berje R., Calbet A., Thingstad F., Jeong J.J., Burkholder J., Glibert P., Granéli E., Lundgren V. Defining planktonic protist functional groups on mechanisms for energy and nutrient acquisition; incorporation of diverse mixotrophic strategies. Protist. 167:160-120 doi:10.1016/j.protis.2016.01.003.
Pinhassi J., DeLong E.F., Béjà O., González J.M., Pedrós-Alió C. Marine bacterial and archaeal rhodopsins: Genetic diversity, physiology and ecology. Micro Mol Bio Rev. 80(4):929-954. doi:10.1128/MMBR.00003-16.
Repeta D.J., Ferrón S., Sosa O.A., Johnson C.G., Repeta L.D., Acker M., DeLong E.F., Karl D.M. Marine methane paradox explained by bacterial degradation of dissolved organic matter. Nat. Geosci. 9:884-887. doi:10.1038/ngeo2837.
Rii Y.M., Duhamel S., Bidigare R.R., Karl D.K., Repeta D.J., Church M.J. Diversity and productivity of photosynthetic picoeukaryotes in biogeochemically distinct regions of the South East Pacific Ocean. Limnol Oceanogr. 61(3):806-824. doi:10.1002/lno.10255.
Rii Y.M, Karl D.M., Church M.J. Temporal and vertical variability in picoplankton primary productivity in the North Pacific Subtropical Gyre. MEPS. 563:1-18. doi:10.3354/meps11954.
Rouco M., Haley S.T., Alexander H., Dyhrman S.T. Diversity of the Trichodesmium holobiont. Environ Microbiol. 18:5151-5160. doi:10.1111/1462-2920.13513.
Rouco M., Haley S.T., Alexander H., Wilson S.T., Karl D.M., Dyhrman S.T. Variable distribution of Trichodesmium clades in the North Pacific Ocean. Environ Microbiol Rep. 8:1058-1066. doi:10.1111/1758-2229.12488.
Shilova I.N., Robidart J.C., DeLong E.F., Zehr J.P. Genetic diversity affects the daily transcriptional oscillations of marine microbial populations. PLoS ONE. 11(1):e0146706. 11 Jan. doi:10.1371/journal.pone.0146706.
Talarmin A., Lomas M.W., Bozec Y., Savoye N., Frigstad H., Karl D.M., Martiny A.C. Seasonal and long-term changes in elemental concentrations and ratios of marine particulate organic matter. Global Biogeochem Cycles. 30(11):1699-1711. doi:10.1002/2016GB005409.
Ward B.A., Follows M.J. Marine mixotrophy increases trophic transfer efficiency, mean organism size, and vertical carbon flux. PNAS USA. 113(11):2958-2963. doi:10.1073/pnas.1517118113.
Wigington C.H., Sonderegger D., Brussard C.P.D., Buchan A., Finke J.F., Fuhrman J.A., Lennon J.T., Middelboe M., Suttle C.A., Stock C., Wilson W.H., Wommack K.E., Wilhelm S.W., Weitz J.S. Re-examination of the relationship between marine virus and microbial cell abundances. Nat Microbiol. 1:15024. 25 Jan. doi:10.1038/nmicrobiol.2015.24. Supplementary Information. Interactive data portal.
Yelton A.P., Acinas S.G., Sunagawa S., Bork P., Pedros-Alio C., Chisholm S.W. Global genetic capacity for mixotrophy in marine picocyanobacteria. ISME J. 3 May. doi:10.1038/ismej.2016.64.
Zakem E.J., Follows M.J. A theoretical basis for a nanomolar critical oxygen concentration. Limnol Oceanogr. 25 Nov. doi:10.1002/lno.10461.
Zehr J.P., Shilova I.N., Farnelid H.M., del Carmen Muñoz-Marín M., Turk-Kubo K.A. Unusual marine unicellular symbiosis with the nitrogen-fixing cyanobacterium UCYN-A. Nat Microbiol. 2:16214. doi:10.1038/nmicrobiol.2016.214.
Alexander H., Rouco M., Haley S.T., Wilson S.T., Karl D.M., Dyhrman S.T. Functional group specific traits drive shift in ecosystem state in the oligotrophic ocean. PNAS USA. 112(44):E5972-5979. doi:10.1073/pnas.1518165112.
Aylward F.O., Eppley J.M., Smith J.M., Chavez F.P., Scholin C.A., DeLong E.F. Microbial community transcriptional networks are conserved in three domains at ocean basin scales. PNAS USA. 112:5443-5448. doi:10.1073/pnas.1502883112.
Barone B., Bidigare R.R., Church M.J., Karl D.M., Letelier R.M., White A.E. Particle distributions and dynamics in the euphotic zone of the North Pacific Subtropical Gyre. J Geophys Res Oceans. 120:3229-3247. doi:10.1002/2015JC010774.
Biller S.J., Berube P., Lindell D., Chisholm S.W. Prochlorococcus. The structure and function of collective diversity. Nat Rev Microbiol. 13:13-27. doi:10.1038/nrmicro3378.
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